PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011069612.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Dof

Protein Properties

Length: 297aa MW: 32901.2 Da PI: 4.2397

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011069612.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.2	1.5e-37	41	96	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvP+Ggg+rk++++ XP_011069612.1 41 PNCPRCASTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRRA 96 58**************************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-29	17	95	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.0E-32	41	95	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.518	41	95	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	43	79	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence Send to blast
MFTSTATTSE YSILECPPTI RPLVMDRTTS KWKYNNIEIA PNCPRCASTN TKFCYYNNYS 60 LSQPRYFCKG CRRYWTKGGS LRNVPIGGGC RKSRRARATK QVGGTNCTAP ALSPVCMGSS 120 SNESESGLDI DLAAVFAKYV NQNGENEESS CSPGASSGSS DHNVQASPLD LDGQMEDMAM 180 FDQYQKGAVD LISGGDDQIQ QVIPHEFSMH EDHDQFNGQD FVYQDYNAFD QVQQGIALGD 240 ELSADMLWSE GTDLPGFEDQ QSMMQLQDSF GFITNDEQLR FSANLVSDNW GSFDLYA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011069612.1	0.0	PREDICTED: dof zinc finger protein DOF1.2
Swissprot	P68349	3e-41	DOF12_ARATH; Dof zinc finger protein DOF1.2
TrEMBL	A0A022PT43	1e-76	A0A022PT43_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21340.1	6e-42	Dof family protein